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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949427.1_cds_XP_016490331.1_80761
CDS Infomation

[gene=LOC107810105] [db_xref=GeneID:107810105] [protein=short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2] [protein_id=XP_016490331.1] [location=complement(join(25692..25865,26659..26705,26790..26874,27690..27768,27865..28018,28156..28235,28319..28566,30240..30278))] [gbkey=CDS]
Sequence

ATGGCATTGACGGCTCCAATCTCACCGCCATTGTTACAGCGCATTGCGACTACAGGAGGT
GCAAGCGGCATCGGTTTGGAGACAGCAAGAGTTTTAGCTTTGAGGAATGTCCATGTCATT
ATTGCAGCAAGAAATATGGAGGCTGCAAATGAAGCAAAGCAGCAAATTCTGAAGGACAAT
AATGCTGCTCGCGTCGATGTTGAGAAACTTGACCTGAGCTCAATTAGAACAGTGAAGGCA
TTTGCTGATAAATTAAAAGCACTTAACCTTCCTCTCAATATCTTAATAAACAATGCAGGT
ATTATGTTCTGTCCATTTCAGCTTTCAGAAGATGGCATAGAGACGCAATTCGCCACAAAT
CATATAGGTCACTTCTACTTGACTAACCTTCTTATAGACAAAATGAAGGAAACATCAAAA
GCTACTGGTATTCAGGGTAGGATTGTGAACCTGTCATCAATACTTCATCAGTACCCCTAT
AAAGAAGGAATACAATTTCACAAAATCAGTGACAAGAGCAGTTATCAAGAAAGACTAGCA
TATGGGCAATCCAAGTTAGCCAACCTATTGCATTCCAATGAACTTTCTCGTCGCTTGCAG
GAAGAGGGAGCAAATATAACTGTCAACTCAGTGCATCCAGGTTTAATAATGACAAACCTC
ATGAGACATTCTGGTCTTTCAATGAGAATCTTTAGGGCTTTCACTTGTTTCATGTGGAAG
AATGTCCCTCAGGGAGCAGCTACGACATGCTATGTTGCCCTCCATCCAAGTCTAAAAGGC
GTCACTGGAAAGTATTTCGTTGACTGCAATGAGCATGAGCCAAGCAAGCTAGCACAAGAC
GAAGCTTTAGCTCGAAACCTTTGGGATGTCAGTAACAACTTGATCAATGCAGCTTTAAAG
AGTTGA

Peptide Sequence

PEP ID

XP_016490331.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MALTAPISPPLLQRIATTGGASGIGLETARVLALRNVHVIIAARNMEAANEAKQQILKDN
NAARVDVEKLDLSSIRTVKAFADKLKALNLPLNILINNAGIMFCPFQLSEDGIETQFATN
HIGHFYLTNLLIDKMKETSKATGIQGRIVNLSSILHQYPYKEGIQFHKISDKSSYQERLA
YGQSKLANLLHSNELSRRLQEEGANITVNSVHPGLIMTNLMRHSGLSMRIFRAFTCFMWK
NVPQGAATTCYVALHPSLKGVTGKYFVDCNEHEPSKLAQDEALARNLWDVSNNLINAALK
S

Transcript Sequence

Gene sequence data has not been registered.